BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E12SP1|AL425887
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1781 1448 0.0
>3x_Contig1781
Length = 20717
Score = 1448 bits (727), Expect = 0.0
Identities = 776/793 (97%), Gaps = 5/793 (0%)
Strand = Plus / Minus
Query: 1 gcgckggagacgagattggcgtatgagatgcattaggtaatggtgttgtatcaagcccgt 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6044 gcgctggagacgagattggcgtatgagatgcattaggtaatggtgttgtatcaagcccgt 5985
Query: 61 tcacgattatcccattgcctagattgttgtaccggcattggaaattrcatactgctgtgg 120
||||| || |||||||||| ||||||||||||||||||||||| ||| |||||||||
Sbjct: 5984 tcacgttt--cccattgcctg--ttgttgtaccggcattggaaattgcat-ctgctgtgg 5930
Query: 121 aatcgtattgttattagagttaccaccggaaatgctgttctgcatcatcataggaacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5929 aatcgtattgttattagagttaccaccggaaatgctgttctgcatcatcataggaacttg 5870
Query: 181 cccattattcggcaacggcatttatcccggttgctgctgctgctgtaagttgttttgctg 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5869 cccattattcggcaacggcatttttcccggttgctgctgctgctgtaagttgttttgctg 5810
Query: 241 cccaaaagcactgtttaccacatccatcttctgtttcaacaagtacgaattttgaagacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5809 cccaaaagcactgtttaccacatccatcttctgtttcaacaagtacgaattttgaagacc 5750
Query: 301 cccattgttctcaagcccatgcagcacatgtggttgttgcgactgttgaggcatcatacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5749 cccattgttctcaagcccatgcagcacatgtggttgttgcgactgttgaggcatcatacg 5690
Query: 361 agtactattcatagaaggggagaaaagcatcccgtwcatcccaactggcccttgctgctg 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 5689 agtactattcatagaaggggagaaaagcatcccgttcatcccaactggcccttgctgctg 5630
Query: 421 aacarcgcccttcccgaaaaattgctccgaatttggcaatcctccgagctgactaawaag 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5629 aacagcgcccttcccgaaaaattgctccgaatttggcaatcctccgagctgactattaag 5570
Query: 481 agattgcattaaaattctatcgtacttactggagtagtcctaaatgacaactcttaaatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5569 agattgcattaaaattctatcgtacttactggagtagtcctaaatgacaactcttaaatc 5510
Query: 541 agaattgaatcgtattccaaccatatatgtctctgtctcttccttatctaatgctaaagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5509 agaattgaatcgtattccaaccatatatgtctctgtctcttccttatctaatgctaaagg 5450
Query: 601 ctttcctgtttcgttcctctttggcagaaacagaattttcgagggaaatgtcattgtgta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5449 ctttcctgtttcgttcctctttggcagaaacagaattttcgagggaaatgtcattgtgta 5390
Query: 661 cggtgttgatattaccactggcaccacttctcaatggacagtggacccgaatgggtcatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5389 cggtgttgatattaccactggcaccacttctcaatggacagtggacccgaatgggtccat 5330
Query: 721 tgtccagtgtttctgcccctgatctgcatgcttcacaacgttcggtgttatccagccttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5329 tgtccagtgtttctgcccctgatctgcatgcttcacaacgttcggtgttatccagccttt 5270
Query: 781 ctactatttwttt 793
||||||||| |||
Sbjct: 5269 ctactatttattt 5257
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4962
Number of Sequences: 1807
Number of extensions: 4962
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)